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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920934.1_cds_XP_016469984.1_62476
CDS Infomation

[gene=LOC107792297] [db_xref=GeneID:107792297] [protein=squalene synthase-like isoform X2] [protein_id=XP_016469984.1] [location=join(7460..7654,13326..13368,13471..13560,13795..13870,14317..14386,14690..14833,14931..15035,15150..15296,15402..15477,15722..15810,16142..16236,16667..16670)] [gbkey=CDS]
Sequence

ATGGGGATAATAGGAGATATTGTGAGACATCCAAATGAGATATACCCATTGATAAAGCTG
TTGGTAACAGCAAAATTAGCAGAAAAACAAATTCCTTCAAAGCCAAACTGGAGCTTTTGC
TATCTCATGCTCCGCAACATCTCTCGCAGCTTCTCTCTTGTCATTCAACAGCTTCCCCTT
GAGCTTCGAGACGCTGTATGTGTATTCTATTTGGTTCTTCGAGCACTTGACACTGTTGAG
GATGATACCAGCATAGCCACAGAGGTTAAAGTACCTATTCTGATAGCTTTTCATCGACAC
ATATATGATCATGAATGGCATTTTTCATGTGGTACAGATGCCTACAAGGATCTCATGGAC
CAGTTCCATCATGTTTCGATGGCTTTTTTGGAACTTGGAACAAATTATCAGCAGGTAATT
GAGGATATTACTATGAGGATGGGTGAAGGAATGGCTAAATTCATAAGCACGGAGATTCAA
ACAATCGATGATTACGAGGAATATTGTCATTATGTAGCTGGGCTTGCAGGATTAGGCTTG
TCAAAACTTTTCCATGCCTCTGGTAAAGAAGATTTAGCTCCAGATTCTCTTCCCAATGCT
GTCGGCTTATTTCTTCAGAAAACAAATATCATTAGAGATTATTTGGAGGACATAAATGAA
GTACCCAAGTGTCGTATGTTTTGGCCTCGTCAAATTTGGAGTAAATATGTTAACAAACTT
GAGGACTTGAAGTGCGGAGAGAACTCGGTCAAGGCAGTACAATGTCTCAATGACATGGTC
ACTAATGCTTTATCGCATGGGGAAGATTGTCTGGTTTGCCTATCCACGTTACATGATCCA
GCTATCTTTCGATCATGTGCTATTCCACAGATCATGGCTATCGGAACATTGACAATGTGC
TACAACAACGTTGAAGTCTTCAGAGGTGTTGTAAAAATGAGACGAGGTCTCAGTGCCAAG
GTTTTTGACCAGACCAGGACAATGGAAGATGTATATGGTGCTTTTTTCCATTTTTCTTCT
ATACTGAAATCCAAGGTTGACAATAACGATCCAAATGCGACAAATACTTTGAAGCGGATT
GAATCAATCATGAAAACTTGCAGAGACTACTCTGAAACCTTGTCTAAAAGCTAG

Peptide Sequence

PEP ID

XP_016469984.1
PEP Infomation

PREDICTED: squalene synthase-like isoform X2 [Nicotiana tabacum]
Sequence

MGIIGDIVRHPNEIYPLIKLLVTAKLAEKQIPSKPNWSFCYLMLRNISRSFSLVIQQLPL
ELRDAVCVFYLVLRALDTVEDDTSIATEVKVPILIAFHRHIYDHEWHFSCGTDAYKDLMD
QFHHVSMAFLELGTNYQQVIEDITMRMGEGMAKFISTEIQTIDDYEEYCHYVAGLAGLGL
SKLFHASGKEDLAPDSLPNAVGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVNKL
EDLKCGENSVKAVQCLNDMVTNALSHGEDCLVCLSTLHDPAIFRSCAIPQIMAIGTLTMC
YNNVEVFRGVVKMRRGLSAKVFDQTRTMEDVYGAFFHFSSILKSKVDNNDPNATNTLKRI
ESIMKTCRDYSETLSKS

Transcript Sequence

Gene sequence data has not been registered.